Package: wisclabmisc 0.1.1.9000

wisclabmisc: Tools to Support the 'WiscLab'

A collection of 'R' functions for use (and re-use) across 'WiscLab' projects.

Authors:Tristan Mahr [aut, cre]

wisclabmisc_0.1.1.9000.tar.gz
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wisclabmisc_0.1.1.9000.tgz(r-4.6-any)wisclabmisc_0.1.1.9000.tgz(r-4.5-any)
wisclabmisc_0.1.1.9000.tar.gz(r-4.7-any)wisclabmisc_0.1.1.9000.tar.gz(r-4.6-any)
wisclabmisc_0.1.1.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
wisclabmisc/json (API)
NEWS

# Install 'wisclabmisc' in R:

install.packages('wisclabmisc', repos = c('https://tjmahr.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wisclab/wisclabmisc/issues

Pkgdown/docs site:https://wisclab.github.io

Datasets:

data_acq_consonants - Acquisition and developmental descriptions of consonants and vowels
data_acq_vowels - Acquisition and developmental descriptions of consonants and vowels
data_example_intelligibility_by_length - Simulated intelligibility scores by utterance length
data_fake_intelligibility - Fake intelligibility data
data_fake_rates - Fake speaking rate data
data_features_consonants - Phonetic features of consonants and vowels
data_features_vowels - Phonetic features of consonants and vowels
data_tocs_items - Items from the TOCS+ used by the WISC Lab

On CRAN:

4.20 score 2 stars 4 scripts 48 exports 65 dependencies

Last updated from:41fb269057. Checks:7 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	WARNING	231
source / vignettes	OK	299
linux-release-x86_64	WARNING	265
macos-release-arm64	WARNING	102
macos-oldrel-arm64	WARNING	90
windows-devel	WARNING	162
windows-release	WARNING	119
windows-oldrel	WARNING	158
wasm-release	OK	180

Exports:%>%audit_peek audit_poke audit_unwrap audit_wrap brms_args_create check_computed_centiles check_model_centiles check_sample_centiles chrono_age compute_empirical_roc compute_overlap_rate compute_predictive_value_from_rates compute_sens_spec_from_ecdf compute_smooth_density_roc file_rename_with file_replace_name fit_beta_gamlss fit_beta_gamlss_se fit_gen_gamma_gamlss fit_gen_gamma_gamlss_se fit_kmeans format_year_month_age impute_values_by_length info_cross_entropy info_entropy info_kl_divergence info_kl_divergence_matrix info_surprisal join_to_split logitnorm_mean mem_gamlss optimize_beta_gamlss_slope parse_year_month_age parse_yymm_age partial_trapezoid_auc pivot_centiles_longer predict_beta_gamlss predict_centiles predict_gen_gamma_gamlss skip_block tbl_bind tocs_item tocs_length tocs_type trapezoid_auc uniroot_beta_gamlss weight_lengths_with_ordinal_model

Dependencies:askpass cli clipr codetools cpp11 crayon credentials curl desc digest dplyr fs furrr future gamlss gamlss.data gamlss.dist generics gert gitcreds globals glue httr2 ini jsonlite lattice lifecycle listenv magrittr MASS Matrix nlme numDeriv openssl ordinal parallelly pillar pkgconfig pROC purrr R6 rappdirs Rcpp rlang rprojroot rsample rstudioapi sessioninfo slider stringi stringr survival sys tibble tidyr tidyselect ucminf usethis utf8 vctrs warp whisker withr yaml zip

Tools for GAMLSS models

Rendered fromgamlss-tools.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-02-17
Started: 2022-02-11

Tools for ROC curves

Rendered fromroc.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2026-02-06
Started: 2022-02-11

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
A lightweight container for auditing or logging	audit_peek audit_poke audit_unwrap audit_wrap
Set default arguments for brms model fitting	brms_args_create
Compute the percentage of points under each centile line	check_computed_centiles check_model_centiles
Compute chronological age in months	chrono_age
Create an ROC curve from observed data	compute_empirical_roc
Compute overlap rate for (phoneme alignment) intervals	compute_overlap_rate
Compute positive and negative predictive value	compute_predictive_value_from_rates
Compute sensitivity and specificity scores from (weighted) observed data	compute_sens_spec_from_ecdf
Create an ROC curve from smoothed densities	compute_smooth_density_roc
Acquisition and developmental descriptions of consonants and vowels	data_acq_consonants data_acq_vowels
Simulated intelligibility scores by utterance length	data_example_intelligibility_by_length
Fake intelligibility data	data_fake_intelligibility
Fake speaking rate data	data_fake_rates
Phonetic features of consonants and vowels	data_features_consonants data_features_vowels
Items from the TOCS+ used by the WISC Lab	data_tocs_items
Rename file basenames using functions	file_rename_with file_replace_name
Fit a beta regression model (for intelligibility)	fit_beta_gamlss fit_beta_gamlss_se optimize_beta_gamlss_slope predict_beta_gamlss uniroot_beta_gamlss
Fit a generalized gamma regression model (for speaking rate)	fit_gen_gamma_gamlss fit_gen_gamma_gamlss_se predict_gen_gamma_gamlss
Run (scaled) k-means on a dataset.	fit_kmeans
Convert between age in months, years;months, and yymm age formats	format_year_month_age parse_year_month_age parse_yymm_age
Staged imputation	impute_values_by_length
Compute entropy and related measures	info_cross_entropy info_entropy info_kl_divergence info_kl_divergence_matrix info_surprisal
Join data onto resampled IDs	join_to_split
Compute the mean of logit-normal distribution(s)	logitnorm_mean
Fit a gamlss model but store user data	mem_gamlss
Predict and tidy centiles from a GAMLSS model	pivot_centiles_longer predict_centiles
Custom function for printing duckdb database connections	print_duckdb
Skip a block of code without executing it	skip_block
Select and row-bind multiple database tables from the same source together	tbl_bind
Extract the TOCS details from a string (usually a filename)	tocs_item tocs_length tocs_type
Compute AUCs using the trapezoid method	partial_trapezoid_auc trapezoid_auc
Weight utterance lengths by using an ordinal regression model	weight_lengths_with_ordinal_model